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Documents

Previous Awards

The papers receiving these awards were selected from a set of outstanding papers, based on the quantitative and qualitative classifications as well as comments provided by the program committee reviewers, their final classification as full paper and their oral presentation at the conference.

2023 | 2022 | 2021 | 2020 | 2019 | 2018 | 2017 | 2016 | 2015 | 2014 | 2013 | 2012 | 2011 | 2010

BIOINFORMATICS 2023

Best Paper Award


Best Poster Award


Prediction of Antimicrobial Peptides Using Deep Neural Networks
Ümmü G. Söylemez, Malik Yousef and Burcu Bakir-Gungor

BIOINFORMATICS 2022

Best Paper Award


Lossy Compressor Preserving Variant Calling through Extended BWT
Veronica Guerrini, Felipe A. Louza and Giovanna Rosone

Best Student Paper Award


Efficient k-mer Indexing with Application to Mapping-free SNP Genotyping
Mattia Marcolin, Francesco Andreace and Matteo Comin

Best Poster Award


BIOINFORMATICS 2021

Best Paper Award


Backward Pattern Matching on Elastic Degenerate Strings
Petr Procházka, Ondřej Cvacho, Luboš Krčál and Jan Holub

Best Student Paper Award


Applying PySCMGroup to Breast Cancer Biomarkers Discovery
Mazid A. Osseni, Prudencio Tossou, Jacques Corbeil and François Laviolette

Coordinate Systems for Pangenome Graphs based on the Level Function and Minimum Path Covers
Thomas Büchler, Caroline Räther, Pascal Weber and Enno Ohlebusch

Best Poster Award


A Deep Learning Method to Impute Missing Values and Compress Genome-wide Polymorphism Data in Rice
Tanzila Islam, Chyon H. Kim, Hiroyoshi Iwata, Hiroyuki Shimono, Akio Kimura, Hein Zaw, Chitra Raghavan, Hei Leung and Rakesh K. Singh

BIOINFORMATICS 2020

Best Paper Award


Prediction of Dynamical Properties of Biochemical Pathways with Graph Neural Networks
Pasquale Bove, Alessio Micheli, Paolo Milazzo and Marco Podda

Efficient Computation of Base-pairing Probabilities in Multi-strand RNA Folding
Ronny Lorenz, Christoph Flamm, Ivo L. Hofacker and Peter F. Stadler

Best Poster Award


SIRA-HIV: A User-friendly System to Evaluate HIV-1 Drug Resistance from Next-generation Sequencing Data
Letícia M. Raposo, Mônica B. Arruda, Rodrigo M. Brindeiro and Flavio F. Nobre

BIOINFORMATICS 2019

Best Paper Award


Best Student Paper Award


Method Choice in Gene Set Analysis Has Important Consequences for Analysis Outcome
Farhad Maleki, Katie L. Ovens, Elham Rezaei, Alan M. Rosenberg and Anthony J. Kusalik

Best Poster Award


Prediction of Malaria Vaccination Outcomes from Gene Expression Data
Ahmad Shayaan, Indu Ilanchezian and Shrisha Rao

BIOINFORMATICS 2018

Best Paper Award


Best Student Paper Award


Protein Disorder Prediction using Jumping Motifs from Torsion Angles Dynamics in Ramachandran Plots
Jonny Alexander-Uribe, Julián D. Arias-Londoño and Alexandre Perera-Lluna

Best Poster Award


BIOINFORMATICS 2017

Best Paper Award


Best Student Paper Award


Best Poster Award


A Web- and Cloud- based Service for the Clinical Use of a CAD (Computer Aided Detection) System - Automated Detection of Lung Nodules in Thoracic CTs (Computed Tomographies)
M. E. Fantacci, A. Traverso, S. Bagnasco, C. Bracco, D. Campanella, G. Chiara, E. Lopez Torres, A. Manca, D. Regge, M. Saletta, M. Stasi, S. Vallero, L. Vassallo and P. Cerello

BIOINFORMATICS 2016

Best Paper Award


Best Student Paper Award


BioMed Xplorer - Exploring (Bio)Medical Knowledge using Linked Data
Mohammad Shafahi, Hayo Bart and Hamideh Afsarmanesh

Best Poster Award


Use of GeIS for Early Diagnosis of Alcohol Sensitivity
José Fabián Reyes Román and Óscar Pastor López

BIOINFORMATICS 2015

Best Paper Award


Best Student Paper Award


BIOINFORMATICS 2014

Best Paper Award


A Computational Study to Identify TP53 and SREBF2 as Regulation Mediators of miR-214 in Melanoma Progression
Gianfranco Politano, Alfredo Benso, Stefano Di Carlo, Francesca Orso, Alessandro Savino and Daniela Taverna

Best Student Paper Award


BIOINFORMATICS 2013

Best Paper Award


Qualitative Analysis of Gene Regulatory Networks using Network Motifs
Sohei Ito, Takuma Ichinose, Masaya Shimakawa, Naoko Izumi, Shigeki Hagihara and Naoki Yonezaki

Best Student Paper Award


BIOINFORMATICS 2012

Best Paper Award


Best Student Paper Award


LASER DOPPLER FLOWMETERS PROTOTYPES VALIDATION USING MONTE CARLO SIMULATIONS
Edite Figueiras, Rita Campos, Ricardo Oliveira, Luís F. Requicha Ferreira, Frits de Mul and Anne Humeau-Heurtier

BIOINFORMATICS 2011

Best Paper Award


Best Student Paper Award


KINETIC MODELS AND QUALITATIVE ABSTRACTION FOR RELATIONAL LEARNING IN SYSTEMS BIOLOGY
Gabriel Synnaeve, Katsumi Inoue, Andrei Doncescu, Hidetomo Nabeshima, Yoshitaka Kameya, Masakazu Ishihata and Taisuke Sato

BIOINFORMATICS 2010

Best Paper Award


Best Student Paper Award


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