BIOSTEC 2013 - International Joint Conference on Biomedical Engineering Systems and Technologies

16:30 - 17:30 - Foyer Posters Session 2

BIODEVICES

16: Preparation of a PLGA/Calcium Silicate Composite with Gradient Pore Structure Bong-Kyu Choi, Suk Young Kim and Sang-Hoon Rhee
59: Modeling H2 Adsorption Processes at SnO2 Nanowire Surfaces - Parameter Estimation and Simulation G. Tulzer, S. Baumgartner, E. Brunet, G. C. Mutinati, S. Steinhauer, A. Köck and C. Heitzinger
64: BioSigMA - Bio Signal Monitoring Application Daniel Ferreira and Gil Gonçalves
71: Finger Joint Characterization from X-Ray Images for Rheumatoid Arthritis Assessment Joan M. Núñez, Débora Gil and Fernando Vilariño

BIOINFORMATICS

15: A Literature Evaluation of CUDA Compatible Sequence Aligners Yang Liu, Jiang-Yu Li, Yi-Qing Mao, Xiao-Lei Wang and Dong-Sheng Zhao
59: Hadoop-RINS - A Hadoop Accelerated Pipeline for Rapid Nonhuman Sequence Identification Li Jiangyu, Liu Yang, Wang Xiaolei, Mao Yiqing, Wang Yumin and Zhao Dongsheng
60: A Semantic-based Similarity of Human Drug Target Proteins Eduardo C. dos Santos, Marcos A. dos Santos, Bráulio R. G. M. Couto and Julio C. D. Lopes
64: Infrequent, Unexpected, and Contrast Pattern Discovery from Bacterial Genomes by Genome-wide Comparative Analysis Daisuke Ikeda, Osamu Maruyama and Satoru Kuhara
77: MIST: A Tool for Rapid in silico Generation of Molecular Data from Bacterial Genome Sequences Peter Krukczkiewicz, Steven Mutschall, Dillon Barker, James Thomas, Gary Van Domselaar, Victor P. J. Gannon, Catherine D. Carrillo and Eduardo N. Taboada
79: AgED: Extraction and Evaluation of Elliptic Fourier Descriptors from Image Data in Phenotype Assessment Applications Jörgen Brandt and Alexander Heyl
93: Community Detection within Clusters Helps Large Scale Protein Annotation - Preliminary Results of Modularity Maximization for the BAR+ Database Giuseppe Profiti, Damiano Piovesan, Pier Luigi Martelli, Piero Fariselli and Rita Casadio

BIOSIGNALS

9: Voluntary Eye Movement Patterns while Viewing Müller-Lyer Illusion - A New Screening Method for Scotoma Patients Mika Haapala, Antti Rantanen, Aura Falck, Anja Tuulonen, Eero Väyrynen, Tapio Seppänen and Seppo J. Laukka
22: Beat Detection Enhancing using AdaBoost Jakub Kuzilek and Lenka Lhotska
27: Retinal Blood Vessel Segmentation by a MAS Approach Carla Pereira, Jason Mahdjoub, Zahia Guessoum, Luis Gonçalves and Manuel Ferreira
33: Chaos and Nonlinear Time-series Analysis of Finger Pulse Waves for Depression Detection Tuan D. Pham, Truong Cong Thang, Mayumi Oyama-Higa, Hoc X. Nguyen, Hameed Saji and Masahide Sugiyama
44: Quantitative Assessment of Diabetics with Various Degrees of Autonomic Neuropathy Chuang-Chien Chiu, Shoou-Jeng Yeh and Yi-Chun Kuo
48: Dominant Frequency, Regularity and Organization Indexes Response to Preprocessing Filter Variations on Simulated Electrograms During Atrial Fibrillation Andrés Orozco-Duque, Juan P. Ugarte, Catalina Tobón, Carlos A. Morillo, Javier Saiz and John Bustamante
49: Support Vector Machine and Artificial Neural Network Implementation in Embedded Systems for Real Time Arrhythmias Detection Andrés Orozco-Duque, Santiago Rúa, Santiago Zuluaga, Alfredo Redondo, Jose V. Restrepo and John Bustamante
66: A Signal-independent Algorithm for Information Extraction and Signal Annotation of Long-term Records Rodolfo Abreu, Joana Sousa and Hugo Gamboa
86: Session-independent EEG-based Workload Recognition Felix Putze, Markus Mülller, Dominic Heger and Tanja Schultz
102: Comparison of Two Techniques for Lifting Low-lying Objects on a Table - Part I: Setup, ECG and Motion Measurement Harald Loose, Katja Orlowski, Angelina Thiers and Laura Tetzlaff

HEALTHINF

5: Integrating CCD Documents - A Way towards Effective Analysis of Patients’ Health Documentation Juha Puustjärvi and Leena Puustjärvi
9: Towards a Process Assessment Model for IEC 80001-1 Silvana Togneri MacMahon, Fergal McCaffery and Frank Keenan
10: Assessing Against IEC 80001-1 Silvana Togneri MacMahon, Fergal Mc Caffery, Sherman Eagles, Frank Keenan, Marion Lepmets and Alain Renault
76: Managing the Process Conglomeration in Health and Social Care Monica Winge, Paul Johannesson, Erik Perjons and Benkt Wangler
78: Combining Syntactic and Semantic Vector Space Models in the Health Domain by using a Clustering Ensemble Flora Amato, Francesco Gargiulo, Antonino Mazzeo, Sara Romano and Carlo Sansone
84: SOA and Cloud based Architecture for Non-invasive Health Monitoring Mohamed Adel Serhani, Elarbi Badidi and Abdelghani Benharref

08:30	Welcome Desk & Registration (08:30 - 09:00)
09:00	09:00 - 10:30 - Room MR.05 Parallel Session 4 - BIODEVICES 53: Non-Thermal Atmospheric Plasma for Endodontic Treatment Avinash S. Bansode, Aumir Beg, Swanandi Pote, Bushra Khan, Rama Bhadekar, Alok Patel, S. V. Bhoraskar and V. L. Mathe 43: Inspired Sinewave Technique to Non-invasive Lung Function Testing - An Introduction and Update of Recent Developments Phi Anh Phan, Sara Ffrench-constant, Andrew Farmery and Clive E. W. Hahn 45: Vibration Diagnostic Probe for Discogenic Pain Due to a Fissure in an Annulus Fibrosus Jae-Cheon Kim, Giseok Kang, Hyoung-Ihl Kim and Jong-Hyun Lee 75: Prototype and Graphical Interface for Selective Exhaled Air Acquisition Fábio Dias, José Alves, Fábio Januário, José Luís Ferreira and Valentina Vassilenko 09:00 - 10:30 - Room MR.06 Parallel Session 4 - BIOINFORMATICS 67: A Predictive Alignment-free Method based on Logistic Regression for Feature Selection and Classification of Protein Sequences Braulio Roberto Goncalves Marinho Couto, Marcelo Matos Santoro, Ana Paula Ladeira and Marcos A. dos Santos 86: Structural Analysis of Nuclear Magnetic Resonance Spectroscopy Data Alejandro Chinea and José L. González Mora 90: Can Software Transactional Memory Make Concurrent Programs Simple and Safe? Ketil Malde 95: Multiple RNA Interaction - Formulations, Approximations, and Heuristics Saad Mneimneh, Syed Ali Ahmed and Nancy L. Greenbaum 09:00 - 10:30 - Room MR.07 Parallel Session 4 - BIOSIGNALS 4: Continuous Nasal Airflow Resistance during Birch Pollen Provocation Test Tiina M. Seppänen, Olli-Pekka Alho, Aleksi Laajala, Elina Rahkola and Tapio Seppänen 61: Local PWV and Other Hemodynamic Parameters Assessment - Validation of a New Optical Technique in an Healthy Population T. Pereira, I. Santos, T. Oliveira, P. Vaz, T. Pereira, H. Santos, H. Pereira, V. Almeida, J. Cardoso and C. Correia 32: Indices and Repeatability Tests of Cardiovascular Function Performed on the Arterial Distension Waveform - Case Study: Angiography Intervention V. G. Almeida, J. Borba, H. C. Pereira, T. Pereira, J. Cardoso and C. Correia 09:00 - 10:30 - Room MR.08 Parallel Session 4 - HEALTHINF 25: TEBRA: An Automatic Prompting System for Persons with Cognitive Disabilities in Brushing Teeth Christian Peters, Thomas Hermann and Sven Wachsmuth 63: Supporting Strategic Planning with Interactive Visualization - A Case Study of Patient Flow through a Large Hospital Dominique Brodbeck, Markus Degen and Andreas Walter 83: Computational Modeling of Sleep Stage Dynamics using Weibull Semi-Markov Chains Chiying Wang, Sergio A. Alvarez, Carolina Ruiz and Majaz Moonis
10:30	Coffee-Break (10:30 - 10:45)
10:45	10:45 - 11:45 - Room MR.10 Keynote Lecture Source Separation for Biomedical Signals: Blind or not Blind? Christian Jutten, GIPSA-lab, France
11:45	11:45 - 13:00 - Room MR.05 Parallel Session 5 - BIODEVICES 10: Hemorrhage Control by Short Electrical Pulses - In Vivo Experiments Guy Malki, Ofer Barnea and Yossi Mandel 38: The Design of a Fully Differential Capacitive Pressure Sensor with Unbalanced Parasitic Input Capacitances in 130nm CMOS Technology B. T. Bradford, W. Krautschneider and D. Schroeder 41: Investigation of the Effect of Extremely Low Frequency (ELF) Pulsed Electromagnetic Field (PEMF) on Collagenase Enzyme Kinetics Istiaque Ahmed, Vuk Vojisavljevic and Elena Pirogova 44: Analysis of Fault Injection in Implantable Capacitive Blood-pressure Sensors J. A. Miguel, Y. Lechuga and M. Martinez 11:45 - 13:00 - Room MR.06 Parallel Session 5 - BIOINFORMATICS 81: A Methodology for Optimizing the Cost Matrix in Cost Sensitive Learning Models applied to Prediction of Molecular Functions in Embryophyta Plants S. García-López, J. A. Jaramillo-Garzón, L. Duque-Muñoz and C. G. Castellanos-Domínguez 82: Mining Association Rules that Incorporate Transcription Factor Binding Sites and Gene Expression Patterns in C. elegans Hao Wan, Gregory Barrett, Carolina Ruiz and Elizabeth F. Ryder 14: Performance of Beta-Binomial SGoF Multitesting Method for Dependent Gene Expression Levels - A Simulation Study Irene Castro-Conde and Jacobo de Uña-Álvarez 11:45 - 13:00 - Room MR.07 Parallel Session 5 - BIOSIGNALS 87: Exploratory EEG Analysis using Clustering and Phase-locking Factor Carlos Carreiras, Helena Aidos, Hugo Silva and Ana Fred 26: Performance Evaluation of Methods for Correcting Ocular Artifacts in Electroencephalographic (EEG) Recordings Murielle Kirkove, Clémentine François, Aurélie Libotte and Jacques G. Verly 83: EEG Discrimination with Artificial Neural Networks Sérgio Daniel Rodrigues, João Paulo Teixeira and Pedro Miguel Rodrigues 11:45 - 13:00 - Room MR.08 Parallel Session 5 - HEALTHINF 67: Electronic Health Records Research in a Health Sector Environment with Multiple Provider Types Samantha S. R. Crossfield and Susan E. Clamp 107: A New Approach to the Transition from Paper to Electronic Medical Records Ghadah Khojah
13:00	Lunch (13:00 - 14:30)
14:30	14:30 - 15:30 - Room MR.10 Keynote Lecture The Present and Future of Devices for Neural Recording Adam Kampff, Champalimaud Foundation, Portugal
15:30	15:30 - 16:30 - Room MR.05 Parallel Session 6 - BIODEVICES 12: Beat-by-Beat Monitoring of Systolic Blood Pressure based on an ASIC and a Mobile Phone for Ambulatory Application Wenxi Chen, Ming Huang, Xin Zhu, Kei-ichiro Kitamura and Tetsu Nemoto 14: Flexible Array of Active Concentric Ring Electrodes for Surface Bioelectrical Recordings - Application to Non-invasive Recordings of EEnG J. Garcia-Casado, V. Zena, G. Prats-Boluda, Y. Ye-Lin and E. Garcia-Breijo 15:30 - 16:30 - Room MR.06 Parallel Session 6 - BIOINFORMATICS 21: Computational Study of the Electrostatic Coupling of Membrane-spanning α-Helices Controlled by Dielectric Media Tarunendu Mapder and Lipika Adhya 78: Comparing Viral (HIV) and Bacterial (Staphylococcus aureus) Infection of the Bone Tissue Mohammad Ali Moni, Pietro Liò and Luciano Milanesi 15:30 - 16:30 - Room MR.07 Parallel Session 6 - BIOSIGNALS 50: Feature Extraction and Classification of Biosignals - Emotion Valence Detection from EEG Signals A. M. Tomé, A. R. Hidalgo-Muñoz, M. M. López, A. R. Teixeira, I. M. Santos, A. T. Pereira, M. Vázquez-Marrufo and E. W. Lang 8: Automatic Burst Detection based on Line Length in the Premature EEG Ninah Koolen, Katrien Jansen, Jan Vervisch, Vladimir Matic, Maarten De Vos, Gunnar Naulaers and Sabine Van Huffel 15:30 - 16:30 - Room MR.08 Parallel Session 6 - HEALTHINF 46: Health Information Systems - Investigating Greek Hospital Employees’ Intention to Use Electronic Health Records Prodromos D. Chatzoglou, Leonidas L. Fragidis, Argiro Nestoridou and Vassilios P. Aggelidis 47: Action Sequencing and Error Production in Stroke Patients with Apraxia - Behavioral Modeling using Bayesian Logic Networks Charmayne Mary Lee Hughes, Moritz Tenorth, Marta Bienkiewicz and Joachim Hermsdörfer 50: Diagnosing Chronic Obstructive Pulmonary Disease with Artificial Neural Networks using Health Expert Guidelines Maria Angélica de Oliveira Camargo-Brunetto and André R. Gonçalves 15:30 - 16:30 - Room MR.09 Tutorial MATHEMATICS OF BIOINFORMATICS - Theory, Practice and Applications Matthew He
16:30	16:30 - 17:30 - Foyer Posters Session 2 BIODEVICES 16: Preparation of a PLGA/Calcium Silicate Composite with Gradient Pore Structure Bong-Kyu Choi, Suk Young Kim and Sang-Hoon Rhee 59: Modeling H2 Adsorption Processes at SnO2 Nanowire Surfaces - Parameter Estimation and Simulation G. Tulzer, S. Baumgartner, E. Brunet, G. C. Mutinati, S. Steinhauer, A. Köck and C. Heitzinger 64: BioSigMA - Bio Signal Monitoring Application Daniel Ferreira and Gil Gonçalves 71: Finger Joint Characterization from X-Ray Images for Rheumatoid Arthritis Assessment Joan M. Núñez, Débora Gil and Fernando Vilariño BIOINFORMATICS 15: A Literature Evaluation of CUDA Compatible Sequence Aligners Yang Liu, Jiang-Yu Li, Yi-Qing Mao, Xiao-Lei Wang and Dong-Sheng Zhao 59: Hadoop-RINS - A Hadoop Accelerated Pipeline for Rapid Nonhuman Sequence Identification Li Jiangyu, Liu Yang, Wang Xiaolei, Mao Yiqing, Wang Yumin and Zhao Dongsheng 60: A Semantic-based Similarity of Human Drug Target Proteins Eduardo C. dos Santos, Marcos A. dos Santos, Bráulio R. G. M. Couto and Julio C. D. Lopes 64: Infrequent, Unexpected, and Contrast Pattern Discovery from Bacterial Genomes by Genome-wide Comparative Analysis Daisuke Ikeda, Osamu Maruyama and Satoru Kuhara 77: MIST: A Tool for Rapid in silico Generation of Molecular Data from Bacterial Genome Sequences Peter Krukczkiewicz, Steven Mutschall, Dillon Barker, James Thomas, Gary Van Domselaar, Victor P. J. Gannon, Catherine D. Carrillo and Eduardo N. Taboada 79: AgED: Extraction and Evaluation of Elliptic Fourier Descriptors from Image Data in Phenotype Assessment Applications Jörgen Brandt and Alexander Heyl 93: Community Detection within Clusters Helps Large Scale Protein Annotation - Preliminary Results of Modularity Maximization for the BAR+ Database Giuseppe Profiti, Damiano Piovesan, Pier Luigi Martelli, Piero Fariselli and Rita Casadio BIOSIGNALS 9: Voluntary Eye Movement Patterns while Viewing Müller-Lyer Illusion - A New Screening Method for Scotoma Patients Mika Haapala, Antti Rantanen, Aura Falck, Anja Tuulonen, Eero Väyrynen, Tapio Seppänen and Seppo J. Laukka 22: Beat Detection Enhancing using AdaBoost Jakub Kuzilek and Lenka Lhotska 27: Retinal Blood Vessel Segmentation by a MAS Approach Carla Pereira, Jason Mahdjoub, Zahia Guessoum, Luis Gonçalves and Manuel Ferreira 33: Chaos and Nonlinear Time-series Analysis of Finger Pulse Waves for Depression Detection Tuan D. Pham, Truong Cong Thang, Mayumi Oyama-Higa, Hoc X. Nguyen, Hameed Saji and Masahide Sugiyama 44: Quantitative Assessment of Diabetics with Various Degrees of Autonomic Neuropathy Chuang-Chien Chiu, Shoou-Jeng Yeh and Yi-Chun Kuo 48: Dominant Frequency, Regularity and Organization Indexes Response to Preprocessing Filter Variations on Simulated Electrograms During Atrial Fibrillation Andrés Orozco-Duque, Juan P. Ugarte, Catalina Tobón, Carlos A. Morillo, Javier Saiz and John Bustamante 49: Support Vector Machine and Artificial Neural Network Implementation in Embedded Systems for Real Time Arrhythmias Detection Andrés Orozco-Duque, Santiago Rúa, Santiago Zuluaga, Alfredo Redondo, Jose V. Restrepo and John Bustamante 66: A Signal-independent Algorithm for Information Extraction and Signal Annotation of Long-term Records Rodolfo Abreu, Joana Sousa and Hugo Gamboa 86: Session-independent EEG-based Workload Recognition Felix Putze, Markus Mülller, Dominic Heger and Tanja Schultz 102: Comparison of Two Techniques for Lifting Low-lying Objects on a Table - Part I: Setup, ECG and Motion Measurement Harald Loose, Katja Orlowski, Angelina Thiers and Laura Tetzlaff HEALTHINF 5: Integrating CCD Documents - A Way towards Effective Analysis of Patients’ Health Documentation Juha Puustjärvi and Leena Puustjärvi 9: Towards a Process Assessment Model for IEC 80001-1 Silvana Togneri MacMahon, Fergal McCaffery and Frank Keenan 10: Assessing Against IEC 80001-1 Silvana Togneri MacMahon, Fergal Mc Caffery, Sherman Eagles, Frank Keenan, Marion Lepmets and Alain Renault 76: Managing the Process Conglomeration in Health and Social Care Monica Winge, Paul Johannesson, Erik Perjons and Benkt Wangler 78: Combining Syntactic and Semantic Vector Space Models in the Health Domain by using a Clustering Ensemble Flora Amato, Francesco Gargiulo, Antonino Mazzeo, Sara Romano and Carlo Sansone 84: SOA and Cloud based Architecture for Non-invasive Health Monitoring Mohamed Adel Serhani, Elarbi Badidi and Abdelghani Benharref
17:00	Coffee-Break (17:00 - 17:15)
17:30	17:30 - 19:00 - Room MR.05 Parallel Session 7 - BIODEVICES 51: Polymeric Micro Check Valve for Glaucoma Treatment - Considering Rate of Aqueous Humor Formation Chang-Ju Park, Jaekwon Lee, Byungphil Mun, Jae-Yong An, Seunghwan Moon and Jong-Hyun Lee 9: Towards a Dynamic Tibial Component for Postoperative Fine-tuning Adjustment of Knee Ligament Imbalance Andrea Collo, Shaban Almouahed, Philippe Poignet, Chafiaa Hamitouche and Eric Stindel 19: Fabrication of Straight Stainless-Steel Micro-Coils for the Use of Biodevice Components Toshiyuki Horiuchi, Hiroshi Sakabe, Takao Yuzawa and Daichi Yamamoto 35: DYNAMIC CALIBRATION OF FORCE PLATFORMS BY MEANS OF A PARALLEL ROBOT E. Brau, J. Cazalilla, M. Vallés, A. Besa, A. Valera, V. Mata and A. Page 17:30 - 19:00 - Room MR.06 Parallel Session 7 - BIOINFORMATICS 68: Classification of HEp-2 Staining Patterns in ImmunoFluorescence Images - Comparison of Support Vector Machines and Subclass Discriminant Analysis Strategies Ihtesham Ul Islam, Santa Di Cataldo, Andrea Bottino, Elisa Ficarra and Enrico Macii 71: Naïve Bayes Domain Adaptation for Biological Sequences Nic Herndon and Doina Caragea 48: Predicting Molecular Functions in Plants using Wavelet-based Motifs G. Arango-Argoty, A. F. Giraldo-Forero, J. A. Jaramillo-Garzón, L. Duque-Muñoz and G. Castellanos-Dominguez 91: Generalized Association Rules for Connecting Biological Ontologies Fernando Benites and Elena Sapozhnikova 17:30 - 19:00 - Room MR.07 Parallel Session 7 - BIOSIGNALS 14: Seven-day Analysis of Atrial Fibrillation and Circadian Rhythms Rebeca Goya-Esteban, Frida Sandberg, Óscar Barquero-Pérez, Arcadio Garcia-Alberola, Leif Sörnmo and José Luis Rojo-Álvarez 20: Statistical Modeling of Atrioventricular Nodal Function during Atrial Fibrillation - An Update Valentina D. A. Corino, Frida Sandberg, Federico Lombardi, Luca T. Mainardi and Leif Sörnmo 65: Phase-Rectified Signal Averaging to Evaluate ANS Development in Premature Infants Maristella Lucchini, Devy Widjaja, Carolina Varon, Katrien Jansen and Sabine Van Huffel 17:30 - 19:00 - Room MR.08 Parallel Session 7 - HEALTHINF 42: Contextualisation of ABAC Attributes through a Generic XACML Functionality Extension Mechanism Brecht Claerhout, Kristof De Schepper, David Pérez del Rey and Anca Bucur 16: ePULab - An Adaptive e-Learning Tool for Pressure Ulcer Evaluation Laura Morente and Francisco J. Veredas 27: Policy-based Emergency Bio-data Transmission Architecture for Smart Healthcare Service Jae-Wook Nah, Seung-Man Chun and Jong-Tae Park 48: eXiTCDSS: A Framework for a Workflow-based CBR for Interventional CDSS - Application to Transcatheter Aortic Valve Implantation (TAVI) Andres El-Fakdi, Francisco Gamero, Joaquim Meléndez and Roberto Petite 100: Development of a Process Assessment Model for Assessing Securityof IT Networks Incorporating Medical Devices against ISO/IEC 15026-4 Anita Finnegan, Fergal Mc Caffery and Gerry Coleman 17:30 - 19:00 - Room MR.09 Tutorial MATHEMATICS OF BIOINFORMATICS - Theory, Practice and Applications Matthew He